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There has been considerable interest in the potential application of terahertz (THz) time domain spectroscopy (TDS) for a variety of problems, including the detection of explosive devices and imaging for biomedical applications. The THz regime has many advantages, including the possibility of a safe (non-ionizing) screening modality and the potential for high-resolution 3D imaging. It also has the advantage of exhibiting spectral peaks that can be used, for example, to classify explosives or detect the presence of cancerous cells.